BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB015G03LP1|AL426896
(1019 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1779 1279 0.0
3x_Contig1203 238 1e-62
>3x_Contig1779
Length = 24855
Score = 1279 bits (644), Expect = 0.0
Identities = 664/668 (99%), Gaps = 2/668 (0%)
Strand = Plus / Plus
Query: 5 aggatcaacaatatcaacttccgacaaaacggagctttcactcaactgttcgaacaccgg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24188 aggatcaacaatatcaacttccgacaaaacggagctttcactcaactgttcgaacaccgg 24247
Query: 65 ctttagtttcttacaatgtgagctccaattggtataatatttaaccactgtgtacgtagg 124
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 24248 ctttagtttcttacaatgtgagcaccaattggtataatatttaaccactgtgtacgtagg 24307
Query: 125 gttggtagcattgaaattgttgacaactccataaaactggtctaacgacgtcacggattc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24308 gttggtagcattgaaattgttgacaactccataaaactggtctaacgacgtcacggattc 24367
Query: 185 aactattgcgagggcaacggttgcaatcagagatagacataagaggatcttcatacttga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24368 aactattgcgagggcaacggttgcaatcagagatagacataagaggatcttcatacttga 24427
Query: 245 gttttagaagaattccatatggtttggttgtatctagtagggaattcgaaccatcatcta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24428 gttttagaagaattccatatggtttggttgtatctagtagggaattcgaaccatcatcta 24487
Query: 305 agaagccctttatttgattgaaccacttcttcaaatcaaggtattttatttaatcttttt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24488 agaagccctttatttgattgaaccacttcttcaaatcaaggtattttatttaatcttttt 24547
Query: 365 tttttttatggaagttgtatttctaagcacgagttaattagaaagtgtgaatgggtatat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24548 tttttttatggaagttgtatttctaagcacgagttaattagaaagtgtgaatgggtatat 24607
Query: 425 gtttatatacttagattctcttatccaaaatagttctggcacaaaacatgtagtatgttg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24608 gtttatatacttagattctcttatccaaaatagttctggcacaaaacatgtagtatgttg 24667
Query: 485 aacgtgagatacacatgagccatgcacaagtgaaagatgtgaaacactatttattaagat 544
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 24668 aacgtgagatacacatgagcaatgcacaagtgaaagatgtgaaacactatttattaagat 24727
Query: 545 gcagagtcatgtctagaaatcgtatataaaatgtctataatgtaaaaagccctgttctct 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24728 gcagagtcatgtctagaaatcgtatataaaatgtctataatgtaaaaagccctgttctct 24787
Query: 605 tcttaccgaatgggtatataaata-atgttgatgcaaataatccgaca-gagataccaat 662
|||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 24788 tcttaccgaatgggtatataaatatatgttgatgcaaataatccgacatgagataccaat 24847
Query: 663 tgaaactt 670
||||||||
Sbjct: 24848 tgaaactt 24855
>3x_Contig1203
Length = 4988
Score = 238 bits (120), Expect = 1e-62
Identities = 136/140 (97%), Gaps = 2/140 (1%)
Strand = Plus / Plus
Query: 878 atataccaataacgaacgccgccatagcagatgtgaattctgttgaatttgcaaaatgct 937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 atataccaataacgaacgccgccatagcagatgtgaattctgttgaatttgcaaaatgct 62
Query: 938 taccagaaaagtacgtyacaacataaccacaacatgagatgagtgtcatgacaggc-act 996
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 63 taccagaaaagtacgtcacaacataaccacaacatgagatgagtgtcatgacaggcaact 122
Query: 997 gcgt-cmcctagcttggtta 1015
|||| | |||||||||||||
Sbjct: 123 gcgtccacctagcttggtta 142
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 13,905
Number of Sequences: 1807
Number of extensions: 13905
Number of successful extensions: 110
Number of sequences better than 1.0e-20: 2
length of query: 1019
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1003
effective length of database: 10,329,639
effective search space: 10360627917
effective search space used: 10360627917
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)